PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_03146
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family ERF
Protein Properties Length: 248aa    MW: 27133.8 Da    PI: 5.3084
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_03146genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.31.6e-1753101355
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 + GVr+++ +gr++AeIrdp++   + r++lg+f+ta eAa a+++a+++++g
  PEQU_03146  53 FLGVRRRP-WGRYAAEIRDPTT---KERHWLGTFDTAHEAALAYDRAALSMKG 101
                 56******.**********965...5************************987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003807.3E-3352115IPR001471AP2/ERF domain
PROSITE profilePS5103220.52152109IPR001471AP2/ERF domain
CDDcd000181.63E-2752108No hitNo description
PRINTSPR003671.4E-75364IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.107.6E-2853108IPR001471AP2/ERF domain
SuperFamilySSF541717.85E-2053109IPR016177DNA-binding domain
PfamPF008475.6E-1155101IPR001471AP2/ERF domain
PRINTSPR003671.4E-77591IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010102Biological Processlateral root morphogenesis
GO:0010432Biological Processbract development
GO:0010451Biological Processfloral meristem growth
GO:0010582Biological Processfloral meristem determinacy
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    Send to blast
MSSQRNQAII PQEEQNPHMM NFSNSPPSQS STTTASSPTE KRGRRKPAEP GRFLGVRRRP  60
WGRYAAEIRD PTTKERHWLG TFDTAHEAAL AYDRAALSMK GTQAKTNFVY ADQNSSFHPF  120
LNPAFHSQTL TLAAAPPPTP FPQLEGQIND FTPFHPGELF GLSGDTRSGE LSSIIPESYW  180
NSSNNSAASR QVSDVSTVKG CTTNGEENVV DEMGSGVWMD EALWEFGACG APTCFDGGMG  240
DFSSSSWM
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A1e-1753108359ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00520DAPTransfer from AT5G18560Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008802124.13e-54PREDICTED: ethylene-responsive transcription factor ERF086-like
TrEMBLM0TUX01e-55M0TUX0_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr8P30180_0013e-55(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP105252838
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18560.14e-43ERF family protein